{"text_format":"1","workbook":"xlsx","n_sheets":2,"sheets":["Instructions","Jhb1"],"not_rendered":{"charts":0,"images":1,"macros":1,"external_links":0,"defined_names":1,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1900"}

{"sheet":"Instructions","index":0,"n_rows":22,"n_cols":3,"rows_kept":22,"cut":false,"hidden":false,"merged":[]}
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[null,"SASCM Laboratory Surveillance"]
[null,"Data for Private Sector Jan-Dec 2014"]
[]
[null,"To use","Click the button below to begin data entry"]
[null,null,"*** On the data entry page, if prompted, click on \"Enable Editing\" / \"Enable Content\" / \"Enable Macro\" "]
[null,null,"Enter the Number of Isolates  in the cells highlighted in Green"]
[null,null,"Enter Number of Susceptible in the cells highlighted in Yellow"]
[null,null,"Use the navigation buttons on each page to move between pages"]
[null,null,"Save the completed file and email to Chetna.Govind@lancet.co.za"]

{"sheet":"Jhb1","index":1,"n_rows":284,"n_cols":3,"rows_kept":284,"cut":false,"hidden":false,"merged":[[274,0,283,0],[252,0,267,0],[208,0,216,0],[220,0,227,0],[229,0,237,0],[187,0,196,0],[241,0,249,0],[151,0,163,0],[77,0,93,0],[167,0,174,0],[176,0,183,0],[198,0,206,0],[59,0,73,0],[116,0,129,0],[133,0,147,0],[23,0,37,0],[6,0,19,0],[41,0,55,0],[97,0,112,0]]}
[]
[]
[null,"Date"]
[null,"Laboratory","Jhb1 "]
[null,"Entered by (Initials):"]
[]
["E. coli:URINE","E. coli:URINE"]
[null,"n = Total of isolates"]
[null,"Ampicillin"]
[null,"1st generation cephalosporins"]
[null,"2nd generation cephalosporins"]
[null,"Parenteral 3rd generation cephalosporins "]
[null,"gentamicin"]
[null,"amikacin"]
[null,"Amox / clavulanate"]
[null,"Ciprofloxacin"]
[null,"Levofloxacin"]
[null,"Cotrimoxazole"]
[null,"Ertapenem"]
[null,"%ESBL"]
[]
[]
[]
["E.coli: BLOODCULTURE","E.coli: BLOODCULTURE"]
[null,"n = Total of isolates"]
[null,"Ampicillin"]
[null,"Cefuroxime"]
[null,"Ceftriaxone/cefotaxime "]
[null,"Cefepime"]
[null,"Amox / clavulanate"]
[null,"Piperacillin/tazobactam"]
[null,"gentamicin"]
[null,"amikacin"]
[null,"Ertapenem"]
[null,"Imipenem/meropenem/doripenem"]
[null,"Ciprofloxacin"]
[null,"Tigecycline"]
[null,"% ESBL"]
[]
[]
[]
["K.pneumo: BLOODCULTURES","K.pneumo: BLOODCULTURES"]
[null,"n = Total of isolates"]
[null,"Ampicillin"]
[null,"Cefuroxime"]
[null,"Ceftriaxone/cefotaxime "]
[null,"Cefepime"]
[null,"Amox / clavulanate"]
[null,"Piperacillin/tazobactam"]
[null,"Gentamicin"]
[null,"Amikacin"]
[null,"Ertapenem"]
[null,"Imipenem/meropenem/doripenem"]
[null,"Ciprofloxacin"]
[null,"Tigecycline"]
[null,"% ESBL"]
[]
[]
[]
["Enterobacter cloacae &SPP: BLOODCULTURES","Enterobacter cloacae &SPP: BLOODCULTURES"]
[null,"n = Total of isolates"]
[null,"ampicillin"]
[null,"Cefuroxime"]
[null,"Ceftriaxone/cefotaxime "]
[null,"Cefepime"]
[null,"Amox / clavulanate"]
[null,"Piperacillin/tazobactam"]
[null,"Amikacin"]
[null,"Gentamicin"]
[null,"Ertapenem"]
[null,"Imipenem/meropenem/doripenem"]
[null,"Ciprofloxacin"]
[null,"Tigecycline"]
[null,"% ESBL"]
[]
[]
[]
["Carbapenem Resistant Enterobacteriaceae","Carbapenem Resistant Enterobacteriaceae"]
[null,"n = Total of isolates"]
[null,"Species"]
[null,"Klebsiella pneumoniae"]
[null,"Serratia marcescens"]
[null,"Enterobacter cloacae"]
[null,"Citrobacter freundii"]
[null,"Escherichia coli"]
[null,"Morganella morganii"]
[null,"Others"]
[null,"Genotype"]
[null,"OXA-48"]
[null,"VIM"]
[null,"NDM"]
[null,"GES"]
[null,"KPC"]
[null,"IMP"]
[]
[]
[]
["Carbapenem Resistant Enterobacteriaceae","Carbapenem Resistant Enterobacteriaceae"]
[null,"Source"]
[null,"Urine"]
[null,"SSTI"]
[null,"Respiratory tract"]
[null,"Blood"]
[null,"Intra-abdominal "]
[null,"Other"]
[null,"Antibiotic % susceptible"]
[null,"Imi/mero/dori"]
[null,"amikacin"]
[null,"Tigecycline"]
[null,"Colistin"]
[null,"Positive rectal screens"]
[null,"PCR"]
[null,"Culture"]
[]
[]
[]
["P. aeruginosa: BLOODCULTURES","P. aeruginosa: BLOODCULTURES"]
[null,"n = Total of isolates"]
[null,"Ceftazidime"]
[null,"Cefepime"]
[null,"Pip/tazobactam"]
[null,"Gentamicin"]
[null,"Amikacin"]
[null,"Tobramycin"]
[null,"Meropenem"]
[null,"Imipenem"]
[null,"Doripenem"]
[null,"Ciprofloxacin"]
[null,"Polymyxin (Colistin)"]
[null,"Aztreonam"]
[]
[]
[]
["Acinetobacter baumannii:  BLOODCULTURES","Acinetobacter baumannii:  BLOODCULTURES"]
[null,"n = Total of isolates"]
[null,"Ceftazidime"]
[null,"Cefepime"]
[null,"Pip/tazobactam"]
[null,"Gentamicin"]
[null,"Amikacin"]
[null,"Tobramycin"]
[null,"Meropenem"]
[null,"Imipenem"]
[null,"Doripenem"]
[null,"Ciprofloxacin"]
[null,"Polymyxin (Colistin)"]
[null,"Cotrimoxazole"]
[null,"Tigecycline"]
[]
[]
[]
["S. aureus: BLOODCULTURES","S. aureus: BLOODCULTURES"]
[null,"n = Total of isolates"]
[null,"Cloxacillin"]
[null,"Cotrimoxazole"]
[null,"Erythromycin"]
[null,"Clindamycin"]
[null,"Fusidic acid"]
[null,"Rifampicin"]
[null,"Gentamicin"]
[null,"Teicoplanin"]
[null,"Vancomycin"]
[null,"Linezolid"]
[null,"Daptomycin"]
[]
[]
[]
["E. faecalis: BLOODCULTURES","E. faecalis: BLOODCULTURES"]
[null,"n = Total of isolates"]
[null,"Ampicillin"]
[null,"Gentamicin"]
[null,"Teicoplanin"]
[null,"Vancomycin"]
[null,"Linezolid"]
[null,"Daptomycin"]
[]
["E. faecium: BLOODCULTURES","E. faecium: BLOODCULTURES"]
[null,"n = Total of isolates"]
[null,"Ampicillin"]
[null,"Gentamicin"]
[null,"Teicoplanin"]
[null,"Vancomycin"]
[null,"Linezolid"]
[null,"Daptomycin"]
[]
[]
[]
["C. albicans: BLOODCULTURES","C. albicans: BLOODCULTURES"]
[null,"No of isolates"]
[null,"a Fluconazole"]
[null,"Voriconazole"]
[null,"Posaconazole"]
[null,"Amphotericin B"]
[null,"*Caspofungin"]
[null,"Anidulafungin"]
[null,"a Candida albicans isolates that were fluconazole resistant may have had trailing end-points and not elevated MICs"]
[null,"*Caspofungin MIC’s may not be reliable and resistance was not confirmed by testing another agent (e.g. anidulafungin) or by fks gene sequencing"]
[]
["C. albicans: BLOODCULTURES","Candida Non-Albicans: BLOODCULTURES"]
[null,"Candida parapsilosis"]
[null,"Number of Isolates"]
[null,"Fluconazole"]
[null,"Voriconazole"]
[null,"Posaconazole"]
[null,"Amphotericin B"]
[null,"*Caspofungin"]
[null,"Anidulafungin"]
[]
["Candida glabrata","Candida glabrata"]
[null,"Number of Isolates"]
[null,"Fluconazole"]
[null,"Voriconazole"]
[null,"Posaconazole"]
[null,"Amphotericin B"]
[null,"*Caspofungin"]
[null,"Anidulafungin"]
[null,"*Caspofungin MIC’s may not be reliable and resistance was not confirmed by testing another agent (e.g. anidulafungin) or by fks gene sequencing"]
[]
[]
[]
["Candida krusei","Candida krusei"]
[null,"Number of Isolates"]
[null,"Fluconazole"]
[null,"Voriconazole"]
[null,"Posaconazole"]
[null,"Amphotericin B"]
[null,"*Caspofungin"]
[null,"Anidulafungin"]
[]
["Candida tropicalis","Candida tropicalis"]
[null,"Number of Isolates"]
[null,"Fluconazole"]
[null,"Voriconazole"]
[null,"Posaconazole"]
[null,"Amphotericin B"]
[null,"*Caspofungin"]
[null,"Anidulafungin"]
[null,"*Caspofungin MIC’s may not be reliable and resistance was not confirmed by testing another agent (e.g. anidulafungin) or by fks gene sequencing"]
[]
[]
[]
["Candida species","Candida species"]
[null,"Number of Isolates"]
[null,"Fluconazole"]
[null,"Voriconazole"]
[null,"Posaconazole"]
[null,"Amphotericin B"]
[null,"*Caspofungin"]
[null,"Anidulafungin"]
[null,"*Caspofungin MIC’s may not be reliable and resistance was not confirmed by testing another agent (e.g. anidulafungin) or by fks gene sequencing"]
[]
[]
["S. pneumoniae: LRTI","S. pneumoniae: LRTI"]
[null,"n = Total number of isolates"]
[null,"Penicillin~"]
[null,"</=0.06"]
[null,"0.12-2"]
[null,4]
[null,8]
[null,"Telithromycin - susceptible"]
[null,"Erythromycin – susceptible"]
[null,"3rd generation cephalosporins (parenteral)*"]
[null,"Susceptible"]
[null,"IR"]
[null,"HR"]
[null,"Quinolones"]
[null,"Levo"]
[null,"Moxi"]
[null,"~Penicillin breakpoints (oral): CLSI  S</=0.06  IR 0.12-1  HR >/=2                                                                                      "]
[null,"~ Penicillin breakpoints (parenteral non-meningitis): CLSI  S</=2  IR 4  HR >/=8                                                    "]
[null,"* 3rd Cephalosporins (non-meningitis): CLSI  S</=1    IR 2   HR >/=4"]
[]
[]
[]
["Haemophilus influenza","Haemophilus influenza: RTI Upper Resp (ENT)%"]
[null,"No of isolates"]
[null,"Ampicillin"]
[null,"B-lactamase positive"]
[]
[]
[null,"Haemophilus influenza: RTI Lower resp (Sputums)%"]
[null,"No of isolates"]
[null,"Ampicillin"]
[null,"B-lactamase positive"]